Zm00001d054047_T001

No description available

Gene families : OG_01_0002085 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002085_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d054047_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d054047_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_215

Type	GO Term	Name	Evidence	Source
BP	GO:0000469	obsolete cleavage involved in rRNA processing	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	ISM	GOs from InterProScan
MF	GO:0004540	RNA nuclease activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042274	ribosomal small subunit biogenesis	ISM	GOs from InterProScan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR039907	NOB1	PANTHER	58	582
IPR014881	NOB1_Zn-bd	Pfam	435	505
IPR017117	Nob1_euk	PIRSF	47	582
IPR036283	NOB1_Zf-like_sf	SUPERFAMILY	435	498
IPR033411	Ribonuclease_PIN	CDD	78	182
IPR036283	NOB1_Zf-like_sf	Gene3D	429	504
IPR033411	Ribonuclease_PIN	Pfam	71	157
IPR014881	NOB1_Zn-bd	Pfam	435	505
IPR017117	Nob1_euk	PIRSF	47	582
IPR036283	NOB1_Zf-like_sf	SUPERFAMILY	435	498
IPR033411	Ribonuclease_PIN	Pfam	71	157
IPR036283	NOB1_Zf-like_sf	Gene3D	429	504
IPR039907	NOB1	PANTHER	38	238
IPR039907	NOB1	PANTHER	259	290
IPR039907	NOB1	PANTHER	383	582
IPR033411	Ribonuclease_PIN	CDD	78	182

No CAZYmes available for this sequence

External Links

No external refs found!