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  5. Zm00001d054107_T005

Zm00001d054107_T005


Description : tetraticopeptide domain-containing thioredoxin


Gene families : OG_01_0002615 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002615_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d054107_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d054107_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_191


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006636 STI1_HS-bd SMART 397 436
IPR011990 TPR-like_helical_dom_sf Gene3D 132 306
IPR034649 Hip_N CDD 3 37
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 163 272
IPR034649 Hip_N Pfam 2 36
IPR041243 STI1/HOP_DP Pfam 391 441
IPR019734 TPR_repeat SMART 171 204
IPR019734 TPR_repeat SMART 205 238
IPR019734 TPR_repeat SMART 240 273
IPR034649 Hip_N Pfam 2 36
IPR006636 STI1_HS-bd SMART 397 436
IPR019734 TPR_repeat SMART 171 204
IPR019734 TPR_repeat SMART 205 238
IPR019734 TPR_repeat SMART 240 273
IPR034649 Hip_N CDD 3 37
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 163 272
IPR041243 STI1/HOP_DP Pfam 391 441
IPR011990 TPR-like_helical_dom_sf Gene3D 132 306

No CAZYmes available for this sequence

No external refs found!