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  5. Sevir.2G135500.1

Sevir.2G135500.1


Description : 31-kDa RNA binding protein


Gene families : OG_01_0003430 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003430_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G135500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G135500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_44


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 204 293
IPR000504 RRM_dom SMART 116 189
IPR000504 RRM_dom SMART 212 285
IPR000504 RRM_dom Pfam 213 283
IPR000504 RRM_dom Pfam 117 186
IPR000504 RRM_dom ProSiteProfiles 211 289
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 199 294
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 63 198
IPR035979 RBD_domain_sf SUPERFAMILY 111 209
IPR000504 RRM_dom ProSiteProfiles 115 193

No CAZYmes available for this sequence

No external refs found!