Sevir.2G146500.1

Description : DNA binding

Gene families : OG_01_0012134 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012134_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G146500.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G146500.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_29

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003889	FYrich_C	Pfam	68	132
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	844	1165
IPR003889	FYrich_C	ProSiteProfiles	66	147
IPR040092	TBRG1	PANTHER	1	210
IPR040092	TBRG1	PANTHER	213	1159
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	858	1173

No CAZYmes available for this sequence

External Links

No external refs found!