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  5. Sevir.2G171300.1

Sevir.2G171300.1


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0009614 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009614_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G171300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G171300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_156


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 106 289
IPR001680 WD40_rpt Pfam 112 134
IPR001680 WD40_rpt Pfam 138 177
IPR001680 WD40_rpt ProSiteProfiles 144 186
IPR001680 WD40_rpt SMART 137 177
IPR001680 WD40_rpt SMART 520 560
IPR001680 WD40_rpt SMART 93 134
IPR001680 WD40_rpt SMART 180 217
IPR019775 WD40_repeat_CS ProSitePatterns 164 178
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 108 557

No CAZYmes available for this sequence

No external refs found!