Sevir.2G215400.1

Description : RING/U-box superfamily protein

Gene families : OG_01_0003564 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003564_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G215400.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G215400.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_98

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017907	Znf_RING_CS	ProSitePatterns	821	830
IPR013083	Znf_RING/FYVE/PHD	Gene3D	630	719
IPR013083	Znf_RING/FYVE/PHD	Gene3D	174	260
IPR013083	Znf_RING/FYVE/PHD	Gene3D	401	489
IPR001841	Znf_RING	ProSiteProfiles	801	844
IPR044066	TRIAD_supradom	ProSiteProfiles	177	455
IPR001841	Znf_RING	ProSiteProfiles	407	452
IPR001841	Znf_RING	SMART	801	843
IPR001841	Znf_RING	SMART	636	683
IPR001841	Znf_RING	SMART	75	121
IPR001841	Znf_RING	SMART	181	228
IPR001841	Znf_RING	SMART	407	454
IPR031127	E3_UB_ligase_RBR	PANTHER	575	847
IPR002867	IBR_dom	SMART	476	540
IPR002867	IBR_dom	SMART	705	771
IPR002867	IBR_dom	SMART	781	843
IPR002867	IBR_dom	SMART	250	314
IPR017907	Znf_RING_CS	ProSitePatterns	94	103
IPR017907	Znf_RING_CS	ProSitePatterns	654	663
IPR044066	TRIAD_supradom	ProSiteProfiles	632	847
IPR017907	Znf_RING_CS	ProSitePatterns	425	434
IPR001841	Znf_RING	ProSiteProfiles	636	681
IPR001841	Znf_RING	ProSiteProfiles	181	226
IPR031127	E3_UB_ligase_RBR	PANTHER	345	571
IPR031127	E3_UB_ligase_RBR	PANTHER	74	341
IPR017907	Znf_RING_CS	ProSitePatterns	199	208
IPR002867	IBR_dom	Pfam	720	771
IPR002867	IBR_dom	Pfam	266	314
IPR002867	IBR_dom	Pfam	491	540

No CAZYmes available for this sequence

External Links

No external refs found!