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  5. Sevir.2G252500.1

Sevir.2G252500.1


Description : mitochondrial editing factor 22


Gene families : OG_01_0012019 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012019_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G252500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G252500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_36


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt TIGRFAM 495 521
IPR002885 Pentatricopeptide_rpt TIGRFAM 634 667
IPR002885 Pentatricopeptide_rpt TIGRFAM 599 632
IPR002885 Pentatricopeptide_rpt TIGRFAM 391 424
IPR011990 TPR-like_helical_dom_sf Gene3D 568 788
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 492 526
IPR002885 Pentatricopeptide_rpt Pfam 596 643
IPR002885 Pentatricopeptide_rpt Pfam 492 541
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 389 423
IPR002885 Pentatricopeptide_rpt Pfam 569 592
IPR002885 Pentatricopeptide_rpt Pfam 672 695
IPR002885 Pentatricopeptide_rpt Pfam 391 417
IPR011990 TPR-like_helical_dom_sf Gene3D 449 556
IPR011990 TPR-like_helical_dom_sf Gene3D 347 448
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 597 631

No CAZYmes available for this sequence

No external refs found!