Sevir.2G297700.1

Description : histone H2A 12

Gene families : OG_01_0000335 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000335_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G297700.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G297700.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
MF	GO:0046982	protein heterodimerization activity	ISM	GOs from InterProScan
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002119	Histone_H2A	PANTHER	9	153
IPR032454	Histone_H2A_C	Pfam	103	136
IPR007125	Histone_H2A/H2B/H3	Pfam	15	100
IPR009072	Histone-fold	Gene3D	12	142
IPR009072	Histone-fold	SUPERFAMILY	17	139
IPR002119	Histone_H2A	CDD	17	131
IPR032458	Histone_H2A_CS	ProSitePatterns	33	39
IPR002119	Histone_H2A	PRINTS	111	129
IPR002119	Histone_H2A	PRINTS	25	47
IPR002119	Histone_H2A	PRINTS	69	82
IPR002119	Histone_H2A	PRINTS	83	97
IPR002119	Histone_H2A	PRINTS	54	69
IPR002119	Histone_H2A	SMART	14	134

No CAZYmes available for this sequence

External Links

No external refs found!