Sevir.2G309000.1

Description : MATE efflux family protein

Gene families : OG_01_0008070 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008070_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G309000.1	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G309000.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_76

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042910	xenobiotic transmembrane transporter activity	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002528	MATE_fam	Pfam	215	303
IPR002528	MATE_fam	Pfam	373	511
IPR044644	DinF-like	PANTHER	110	565
IPR002528	MATE_fam	TIGRFAM	129	533
IPR044644	DinF-like	CDD	121	553

No CAZYmes available for this sequence

External Links

No external refs found!