Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0190371 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g01363.1 | |
Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_28 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR002885 | Pentatricopeptide_rpt | Pfam | 212 | 236 |
IPR002885 | Pentatricopeptide_rpt | Pfam | 311 | 335 |
IPR002885 | Pentatricopeptide_rpt | Pfam | 239 | 268 |
IPR002885 | Pentatricopeptide_rpt | Pfam | 137 | 165 |
IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 137 | 168 |
IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 209 | 237 |
IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 239 | 273 |
IPR011990 | TPR-like_helical_dom_sf | Gene3D | 187 | 285 |
IPR011990 | TPR-like_helical_dom_sf | Gene3D | 100 | 186 |
IPR011990 | TPR-like_helical_dom_sf | Gene3D | 286 | 350 |
IPR011990 | TPR-like_helical_dom_sf | Gene3D | 351 | 480 |
IPR002885 | Pentatricopeptide_rpt | Pfam | 357 | 418 |
IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 133 | 167 |
IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 206 | 236 |
IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 237 | 271 |
No CAZYmes available for this sequence
No external refs found! |