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  5. Bradi1g02940.3

Bradi1g02940.3


Description : calreticulin 1b


Gene families : OG_01_0000638 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000638_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g02940.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_105


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005783 endoplasmic reticulum ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001580 Calret/calnex PANTHER 12 402
IPR018124 Calret/calnex_CS ProSitePatterns 103 118
IPR009033 Calreticulin/calnexin_P_dom_sf SUPERFAMILY 206 321
IPR009033 Calreticulin/calnexin_P_dom_sf Gene3D 210 311
IPR018124 Calret/calnex_CS ProSitePatterns 248 260
IPR018124 Calret/calnex_CS ProSitePatterns 135 143
IPR001580 Calret/calnex Pfam 265 338
IPR001580 Calret/calnex Pfam 28 263
IPR013320 ConA-like_dom_sf SUPERFAMILY 23 225
IPR009169 Calreticulin PIRSF 5 439
IPR001580 Calret/calnex PRINTS 286 305
IPR001580 Calret/calnex PRINTS 105 123
IPR001580 Calret/calnex PRINTS 248 270
IPR001580 Calret/calnex PRINTS 131 147
IPR001580 Calret/calnex PRINTS 220 233
IPR001580 Calret/calnex PRINTS 319 339

No CAZYmes available for this sequence

No external refs found!