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  5. Bradi1g05110.3

Bradi1g05110.3


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0002121 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002121_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g05110.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_236


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 33 267
IPR000504 RRM_dom ProSiteProfiles 676 770
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 675 768
IPR000504 RRM_dom SMART 525 603
IPR000504 RRM_dom SMART 677 766
IPR000504 RRM_dom SMART 34 107
IPR000504 RRM_dom SMART 283 356
IPR035979 RBD_domain_sf SUPERFAMILY 524 752
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 273 393
IPR000504 RRM_dom ProSiteProfiles 282 360
IPR003954 RRM_dom_euk SMART 34 107
IPR003954 RRM_dom_euk SMART 283 356
IPR000504 RRM_dom ProSiteProfiles 524 607
IPR035979 RBD_domain_sf SUPERFAMILY 280 363
IPR000504 RRM_dom Pfam 35 105
IPR000504 RRM_dom Pfam 284 353
IPR000504 RRM_dom Pfam 526 586
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 4 125
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 435 621
IPR000504 RRM_dom ProSiteProfiles 33 111

No CAZYmes available for this sequence

No external refs found!