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  5. Bradi1g09470.1

Bradi1g09470.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0017182 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017182_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g09470.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 255 298
IPR002885 Pentatricopeptide_rpt Pfam 172 223
IPR002885 Pentatricopeptide_rpt Pfam 329 357
IPR002885 Pentatricopeptide_rpt TIGRFAM 330 361
IPR002885 Pentatricopeptide_rpt TIGRFAM 293 323
IPR002885 Pentatricopeptide_rpt TIGRFAM 258 291
IPR002885 Pentatricopeptide_rpt TIGRFAM 176 202
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 173 207
IPR011990 TPR-like_helical_dom_sf Gene3D 229 399
IPR011990 TPR-like_helical_dom_sf Gene3D 120 228
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 155 321
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 327 361
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 256 290
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 291 325

No CAZYmes available for this sequence

No external refs found!