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Description : PLAT/LH2 domain-containing lipoxygenase family protein
Gene families : OG_01_0000612 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000612_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g11670.1 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_80 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 105 | 232 |
| IPR001024 | PLAT/LH2_dom | Pfam | 131 | 228 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 234 | 946 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 343 | 433 |
| IPR000907 | LipOase | PANTHER | 70 | 946 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 89 | 230 |
| IPR013819 | LipOase_C | Pfam | 242 | 922 |
| IPR020834 | LipOase_CS | ProSitePatterns | 619 | 629 |
| IPR001024 | PLAT/LH2_dom | SMART | 88 | 230 |
| IPR013819 | LipOase_C | PRINTS | 592 | 609 |
| IPR013819 | LipOase_C | PRINTS | 612 | 632 |
| IPR013819 | LipOase_C | PRINTS | 574 | 591 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 89 | 233 |
| IPR001246 | LipOase_plant | PRINTS | 225 | 246 |
| IPR001246 | LipOase_plant | PRINTS | 420 | 436 |
| IPR001246 | LipOase_plant | PRINTS | 298 | 317 |
| IPR001246 | LipOase_plant | PRINTS | 371 | 392 |
| IPR001246 | LipOase_plant | PRINTS | 527 | 551 |
| IPR001246 | LipOase_plant | PRINTS | 459 | 478 |
| IPR001246 | LipOase_plant | PRINTS | 202 | 220 |
| IPR001246 | LipOase_plant | PRINTS | 852 | 866 |
| IPR001246 | LipOase_plant | PRINTS | 265 | 281 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 592 | 606 |
| IPR013819 | LipOase_C | ProSiteProfiles | 232 | 946 |
No CAZYmes available for this sequence
| No external refs found! |