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  5. Bradi1g14190.3

Bradi1g14190.3


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0003152 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003152_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g14190.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_128


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 673 858
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 343 749
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 235 270
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 164 198
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 306 340
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 587 621
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 727 761
IPR011990 TPR-like_helical_dom_sf Gene3D 557 672
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 516 550
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 341 375
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 622 656
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 552 586
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 446 480
IPR002885 Pentatricopeptide_rpt TIGRFAM 166 197
IPR002885 Pentatricopeptide_rpt TIGRFAM 413 446
IPR002885 Pentatricopeptide_rpt TIGRFAM 518 552
IPR002885 Pentatricopeptide_rpt TIGRFAM 343 377
IPR002885 Pentatricopeptide_rpt TIGRFAM 204 236
IPR002885 Pentatricopeptide_rpt TIGRFAM 659 689
IPR002885 Pentatricopeptide_rpt TIGRFAM 483 517
IPR002885 Pentatricopeptide_rpt TIGRFAM 695 719
IPR002885 Pentatricopeptide_rpt TIGRFAM 273 307
IPR002885 Pentatricopeptide_rpt TIGRFAM 624 657
IPR002885 Pentatricopeptide_rpt TIGRFAM 765 797
IPR002885 Pentatricopeptide_rpt TIGRFAM 589 623
IPR002885 Pentatricopeptide_rpt TIGRFAM 308 342
IPR002885 Pentatricopeptide_rpt TIGRFAM 237 272
IPR002885 Pentatricopeptide_rpt TIGRFAM 731 763
IPR002885 Pentatricopeptide_rpt TIGRFAM 449 482
IPR002885 Pentatricopeptide_rpt TIGRFAM 378 412
IPR011990 TPR-like_helical_dom_sf Gene3D 226 334
IPR011990 TPR-like_helical_dom_sf Gene3D 64 225
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 199 234
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 481 515
IPR002885 Pentatricopeptide_rpt Pfam 512 543
IPR011990 TPR-like_helical_dom_sf Gene3D 335 403
IPR011990 TPR-like_helical_dom_sf Gene3D 473 547
IPR011990 TPR-like_helical_dom_sf Gene3D 404 472
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 376 410
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 657 691
IPR002885 Pentatricopeptide_rpt Pfam 413 443
IPR002885 Pentatricopeptide_rpt Pfam 556 578
IPR002885 Pentatricopeptide_rpt Pfam 167 195
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 762 796
IPR002885 Pentatricopeptide_rpt Pfam 446 494
IPR002885 Pentatricopeptide_rpt Pfam 343 389
IPR002885 Pentatricopeptide_rpt Pfam 586 635
IPR002885 Pentatricopeptide_rpt Pfam 202 247
IPR002885 Pentatricopeptide_rpt Pfam 730 771
IPR002885 Pentatricopeptide_rpt Pfam 270 319
IPR002885 Pentatricopeptide_rpt Pfam 658 705
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 411 445
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 271 305
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 692 726

No CAZYmes available for this sequence

No external refs found!