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  5. Bradi1g14976.7

Bradi1g14976.7


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0013570 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013570_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g14976.7
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 473 507
IPR002885 Pentatricopeptide_rpt Pfam 476 503
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 613 647
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 117 151
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 257 291
IPR002885 Pentatricopeptide_rpt Pfam 507 556
IPR002885 Pentatricopeptide_rpt Pfam 399 445
IPR002885 Pentatricopeptide_rpt Pfam 582 625
IPR002885 Pentatricopeptide_rpt Pfam 116 165
IPR002885 Pentatricopeptide_rpt Pfam 11 60
IPR002885 Pentatricopeptide_rpt Pfam 327 375
IPR002885 Pentatricopeptide_rpt Pfam 753 795
IPR002885 Pentatricopeptide_rpt TIGRFAM 224 258
IPR002885 Pentatricopeptide_rpt TIGRFAM 84 117
IPR002885 Pentatricopeptide_rpt TIGRFAM 49 83
IPR002885 Pentatricopeptide_rpt TIGRFAM 721 754
IPR002885 Pentatricopeptide_rpt TIGRFAM 330 363
IPR002885 Pentatricopeptide_rpt TIGRFAM 545 578
IPR002885 Pentatricopeptide_rpt TIGRFAM 190 223
IPR002885 Pentatricopeptide_rpt TIGRFAM 755 789
IPR002885 Pentatricopeptide_rpt TIGRFAM 14 48
IPR002885 Pentatricopeptide_rpt TIGRFAM 259 292
IPR002885 Pentatricopeptide_rpt TIGRFAM 120 153
IPR002885 Pentatricopeptide_rpt TIGRFAM 616 647
IPR002885 Pentatricopeptide_rpt TIGRFAM 154 185
IPR002885 Pentatricopeptide_rpt TIGRFAM 511 543
IPR002885 Pentatricopeptide_rpt TIGRFAM 476 508
IPR011990 TPR-like_helical_dom_sf Gene3D 287 425
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 47 81
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 578 612
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 648 682
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 508 542
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 397 431
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 543 577
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 82 116
IPR002885 Pentatricopeptide_rpt Pfam 636 683
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 222 256
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 718 752
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 753 787
IPR002885 Pentatricopeptide_rpt Pfam 253 281
IPR002885 Pentatricopeptide_rpt Pfam 714 746
IPR002885 Pentatricopeptide_rpt Pfam 78 109
IPR002885 Pentatricopeptide_rpt Pfam 187 212
IPR002885 Pentatricopeptide_rpt Pfam 217 249
IPR011990 TPR-like_helical_dom_sf Gene3D 609 677
IPR011990 TPR-like_helical_dom_sf Gene3D 744 819
IPR011990 TPR-like_helical_dom_sf Gene3D 74 144
IPR011990 TPR-like_helical_dom_sf Gene3D 215 286
IPR011990 TPR-like_helical_dom_sf Gene3D 145 214
IPR011990 TPR-like_helical_dom_sf Gene3D 1 73
IPR011990 TPR-like_helical_dom_sf Gene3D 678 743
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 327 361
IPR011990 TPR-like_helical_dom_sf Gene3D 446 608
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 187 221
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 788 822
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 152 186
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 12 46
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 683 717

No CAZYmes available for this sequence

No external refs found!