1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.2G334850.1

Sevir.2G334850.1


Description : Chalcone and stilbene synthase family protein


Gene families : OG_01_0000081 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000081_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G334850.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G334850.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_242
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_29


Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001099 Chalcone/stilbene_synt_N Pfam 11 234
IPR016039 Thiolase-like SUPERFAMILY 243 393
IPR011141 Polyketide_synthase_type-III PIRSF 8 396
IPR016039 Thiolase-like SUPERFAMILY 10 236
IPR016039 Thiolase-like Gene3D 244 397
IPR012328 Chalcone/stilbene_synt_C Pfam 246 393
IPR016039 Thiolase-like Gene3D 4 236
IPR011141 Polyketide_synthase_type-III PANTHER 7 394

No CAZYmes available for this sequence

No external refs found!