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  5. Bradi1g20737.1

Bradi1g20737.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0011857 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011857_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g20737.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 350 536
IPR002885 Pentatricopeptide_rpt Pfam 313 336
IPR002885 Pentatricopeptide_rpt Pfam 486 507
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 137 171
IPR002885 Pentatricopeptide_rpt TIGRFAM 376 410
IPR002885 Pentatricopeptide_rpt TIGRFAM 341 374
IPR002885 Pentatricopeptide_rpt TIGRFAM 139 173
IPR002885 Pentatricopeptide_rpt TIGRFAM 241 272
IPR011990 TPR-like_helical_dom_sf Gene3D 189 302
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 339 373
IPR002885 Pentatricopeptide_rpt Pfam 338 386
IPR002885 Pentatricopeptide_rpt Pfam 238 284
IPR002885 Pentatricopeptide_rpt Pfam 136 180
IPR032867 DYW_dom Pfam 512 636
IPR011990 TPR-like_helical_dom_sf Gene3D 10 188
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 238 272

No CAZYmes available for this sequence

No external refs found!