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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0009242 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009242_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g21250.1 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 459 | 618 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 463 | 497 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 324 | 358 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 359 | 393 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 533 | 567 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 146 | 195 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 463 | 511 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 359 | 407 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 216 | 265 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 287 | 321 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 416 | 459 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 77 | 108 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 217 | 251 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 219 | 253 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 536 | 568 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 465 | 499 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 396 | 428 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 184 | 218 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 114 | 148 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 361 | 395 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 500 | 534 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 433 | 459 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 326 | 359 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 289 | 315 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 254 | 287 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 149 | 183 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 182 | 216 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 147 | 181 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 112 | 146 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 37 | 175 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 176 | 244 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 388 | 458 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 317 | 387 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 245 | 316 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 537 | 564 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 114 | 144 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 321 | 351 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 282 | 314 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 498 | 532 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 394 | 428 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 252 | 286 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 429 | 459 |
No CAZYmes available for this sequence
| No external refs found! |