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Description : transcription factor jumonji (jmjC) domain-containing protein
Gene families : OG_01_0002126 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002126_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g29247.4 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR003349 | JmjN | ProSiteProfiles | 29 | 70 |
| IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 280 | 342 |
| IPR004198 | Znf_C5HC2 | Pfam | 677 | 727 |
| IPR001606 | ARID_dom | ProSiteProfiles | 103 | 201 |
| IPR019787 | Znf_PHD-finger | ProSiteProfiles | 294 | 344 |
| IPR019787 | Znf_PHD-finger | ProSiteProfiles | 1751 | 1798 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 1471 | 1540 |
| IPR003349 | JmjN | SMART | 28 | 69 |
| IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 297 | 341 |
| IPR036431 | ARID_dom_sf | SUPERFAMILY | 79 | 213 |
| IPR001965 | Znf_PHD | SMART | 296 | 342 |
| IPR001965 | Znf_PHD | SMART | 1490 | 1537 |
| IPR001965 | Znf_PHD | SMART | 1753 | 1796 |
| IPR019787 | Znf_PHD-finger | Pfam | 297 | 343 |
| IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 1754 | 1795 |
| IPR003349 | JmjN | Pfam | 30 | 63 |
| IPR001606 | ARID_dom | Pfam | 100 | 197 |
| IPR036431 | ARID_dom_sf | Gene3D | 107 | 214 |
| IPR001606 | ARID_dom | SMART | 97 | 202 |
| IPR013637 | Lys_sp_deMease-like_dom | Pfam | 993 | 1233 |
| IPR013637 | Lys_sp_deMease-like_dom | Pfam | 808 | 1076 |
| IPR001841 | Znf_RING | ProSiteProfiles | 1491 | 1536 |
| IPR003347 | JmjC_dom | ProSiteProfiles | 435 | 601 |
| IPR003347 | JmjC_dom | Pfam | 468 | 584 |
| IPR003347 | JmjC_dom | SMART | 435 | 601 |
| IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 1740 | 1796 |
No CAZYmes available for this sequence
| No external refs found! |