Sevir.2G353000.1

Description : beta-amylase 5

Gene families : OG_01_0006399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006399_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G353000.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G353000.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_208
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_46

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001554	Glyco_hydro_14	Pfam	82	507
IPR001554	Glyco_hydro_14	PANTHER	68	569
IPR001371	Glyco_hydro_14B_pln	PRINTS	491	505
IPR001371	Glyco_hydro_14B_pln	PRINTS	506	520
IPR001371	Glyco_hydro_14B_pln	PRINTS	396	406
IPR001371	Glyco_hydro_14B_pln	PRINTS	239	248
IPR018238	Glyco_hydro_14_CS	ProSitePatterns	249	259
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	74	555
IPR001554	Glyco_hydro_14	PRINTS	375	386
IPR001554	Glyco_hydro_14	PRINTS	156	177
IPR001554	Glyco_hydro_14	PRINTS	358	374
IPR001554	Glyco_hydro_14	PRINTS	249	271
IPR001554	Glyco_hydro_14	PRINTS	134	152
IPR001554	Glyco_hydro_14	PRINTS	431	453
IPR001554	Glyco_hydro_14	PRINTS	393	416
IPR001554	Glyco_hydro_14	PRINTS	113	127
IPR001554	Glyco_hydro_14	PRINTS	322	341
IPR018238	Glyco_hydro_14_CS	ProSitePatterns	160	168

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH14	412	588	4.5e-179	82	508

External Links

No external refs found!