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  5. Bradi1g35920.3

Bradi1g35920.3


Description : KH domain-containing protein / zinc finger (CCCH type) family protein


Gene families : OG_01_0000640 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000640_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g35920.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_106


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003729 mRNA binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 264 291
IPR036855 Znf_CCCH_sf SUPERFAMILY 264 294
IPR004088 KH_dom_type_1 Pfam 173 236
IPR000571 Znf_CCCH ProSiteProfiles 34 62
IPR036612 KH_dom_type_1_sf SUPERFAMILY 173 266
IPR004087 KH_dom SMART 170 240
IPR000571 Znf_CCCH ProSiteProfiles 100 128
IPR000571 Znf_CCCH Pfam 265 290
IPR036855 Znf_CCCH_sf SUPERFAMILY 35 62
IPR000571 Znf_CCCH SMART 264 290
IPR000571 Znf_CCCH SMART 34 61
IPR000571 Znf_CCCH SMART 100 127
IPR036612 KH_dom_type_1_sf Gene3D 168 264
IPR045877 ZFP36-like PANTHER 3 297
IPR036855 Znf_CCCH_sf SUPERFAMILY 100 131

No CAZYmes available for this sequence

No external refs found!