Sevir.2G355000.1

Description : high chlorophyll fluorescent 109

Gene families : OG_01_0003215 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003215_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G355000.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G355000.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_151

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006415	translational termination	ISM	GOs from InterProScan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016149	translation release factor activity, codon specific	ISM	GOs from InterProScan
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005139	PCRF	Pfam	103	295
IPR004374	PrfB	Hamap	76	442
IPR004374	PrfB	TIGRFAM	79	441
IPR000352	Pep_chain_release_fac_I	Pfam	306	414
IPR045853	Pep_chain_release_fac_I_sf	SUPERFAMILY	103	441
IPR000352	Pep_chain_release_fac_I	ProSitePatterns	321	337
IPR005139	PCRF	SMART	158	270

No CAZYmes available for this sequence

External Links

No external refs found!