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  5. Sevir.2G356300.1

Sevir.2G356300.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0013311 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013311_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G356300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G356300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_207
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_81


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 145 179
IPR044795 THA8L-like PANTHER 49 260
IPR002885 Pentatricopeptide_rpt Pfam 144 192
IPR011990 TPR-like_helical_dom_sf Gene3D 74 260
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 180 214
IPR002885 Pentatricopeptide_rpt TIGRFAM 183 209
IPR002885 Pentatricopeptide_rpt TIGRFAM 148 180

No CAZYmes available for this sequence

No external refs found!