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  5. Bradi1g42750.1

Bradi1g42750.1


Description : Actin binding Calponin homology (CH) domain-containing protein


Gene families : OG_01_0000698 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000698_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g42750.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_101


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
BP GO:0051017 actin filament bundle assembly ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036872 CH_dom_sf Gene3D 247 375
IPR001715 CH_dom CDD 126 239
IPR001715 CH_dom Pfam 270 371
IPR001715 CH_dom Pfam 522 623
IPR001715 CH_dom Pfam 147 239
IPR001715 CH_dom Pfam 397 499
IPR036872 CH_dom_sf SUPERFAMILY 123 624
IPR001715 CH_dom ProSiteProfiles 519 627
IPR036872 CH_dom_sf Gene3D 120 246
IPR001715 CH_dom ProSiteProfiles 124 241
IPR001715 CH_dom ProSiteProfiles 269 372
IPR039959 Fimbrin/Plastin PANTHER 1 686
IPR001715 CH_dom SMART 126 239
IPR001715 CH_dom SMART 271 370
IPR001715 CH_dom SMART 521 625
IPR001715 CH_dom SMART 397 499
IPR001715 CH_dom ProSiteProfiles 395 501
IPR001715 CH_dom CDD 396 498
IPR001715 CH_dom CDD 270 370
IPR001589 Actinin_actin-bd_CS ProSitePatterns 213 237
IPR036872 CH_dom_sf Gene3D 393 508
IPR036872 CH_dom_sf Gene3D 511 624

No CAZYmes available for this sequence

No external refs found!