Sevir.2G364100.2

Description : HSI2-like 1

Gene families : OG_01_0002290 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002290_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G364100.2
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G364100.2
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_12
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_120

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003340	B3_DNA-bd	SMART	462	562
IPR003340	B3_DNA-bd	ProSiteProfiles	462	563
IPR003340	B3_DNA-bd	CDD	460	561
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	459	561
IPR003340	B3_DNA-bd	Pfam	462	561
IPR011124	Znf_CW	ProSiteProfiles	717	767
IPR011124	Znf_CW	Pfam	722	765
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	437	566

No CAZYmes available for this sequence

External Links

No external refs found!