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  5. Sevir.2G369900.1

Sevir.2G369900.1


Description : xylose isomerase family protein


Gene families : OG_01_0003550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003550_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G369900.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G369900.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0009045 xylose isomerase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013022 Xyl_isomerase-like_TIM-brl Pfam 168 322
IPR001998 Xylose_isomerase PRINTS 377 388
IPR001998 Xylose_isomerase PRINTS 177 197
IPR001998 Xylose_isomerase PRINTS 136 158
IPR001998 Xylose_isomerase PRINTS 273 297
IPR001998 Xylose_isomerase PRINTS 224 245
IPR001998 Xylose_isomerase PRINTS 344 355
IPR001998 Xylose_isomerase PRINTS 251 270
IPR001998 Xylose_isomerase PRINTS 315 342
IPR001998 Xylose_isomerase PRINTS 200 219
IPR013452 Xylose_isom_bac TIGRFAM 48 479
IPR001998 Xylose_isomerase ProSiteProfiles 79 480
IPR001998 Xylose_isomerase Hamap 55 480
IPR036237 Xyl_isomerase-like_sf SUPERFAMILY 47 477

No CAZYmes available for this sequence

No external refs found!