Bradi1g59070.1

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0016559 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016559_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi1g59070.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002885	Pentatricopeptide_rpt	Pfam	325	373
IPR002885	Pentatricopeptide_rpt	Pfam	224	271
IPR011990	TPR-like_helical_dom_sf	Gene3D	22	155
IPR011990	TPR-like_helical_dom_sf	Gene3D	301	544
IPR002885	Pentatricopeptide_rpt	TIGRFAM	328	358
IPR002885	Pentatricopeptide_rpt	TIGRFAM	226	260
IPR002885	Pentatricopeptide_rpt	TIGRFAM	364	396
IPR002885	Pentatricopeptide_rpt	Pfam	195	220
IPR002885	Pentatricopeptide_rpt	Pfam	400	425
IPR002885	Pentatricopeptide_rpt	Pfam	166	189
IPR002885	Pentatricopeptide_rpt	Pfam	300	321
IPR032867	DYW_dom	Pfam	499	622
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	326	360
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	224	258
IPR011990	TPR-like_helical_dom_sf	Gene3D	156	282

No CAZYmes available for this sequence

External Links

No external refs found!