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  5. Sevir.2G379200.1

Sevir.2G379200.1


Description : geranylgeranyl pyrophosphate synthase 1


Gene families : OG_01_0007120 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007120_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G379200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G379200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_213
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_84


Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000092 Polyprenyl_synt Pfam 87 330
IPR033749 Polyprenyl_synt_CS ProSitePatterns 277 289
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 55 359
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 60 341
IPR033749 Polyprenyl_synt_CS ProSitePatterns 136 152
IPR000092 Polyprenyl_synt CDD 87 357

No CAZYmes available for this sequence

No external refs found!