Sevir.2G400200.1

Description : RING/FYVE/PHD-type zinc finger family protein

Gene families : OG_01_0012890 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012890_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G400200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G400200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_26

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007461	Ysc84_actin-binding	Pfam	330	455
IPR017455	Znf_FYVE-rel	ProSiteProfiles	152	214
IPR000306	Znf_FYVE	Pfam	148	213
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	147	222
IPR013083	Znf_RING/FYVE/PHD	Gene3D	143	216
IPR000306	Znf_FYVE	SMART	144	215

No CAZYmes available for this sequence

External Links

No external refs found!