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  5. Bradi2g00226.1

Bradi2g00226.1


Description : sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors


Gene families : OG_01_0003889 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003889_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g00226.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000967 Znf_NFX1 Pfam 206 222
IPR000967 Znf_NFX1 Pfam 666 682
IPR000967 Znf_NFX1 Pfam 418 435
IPR000967 Znf_NFX1 Pfam 445 463
IPR000967 Znf_NFX1 Pfam 365 384
IPR000967 Znf_NFX1 Pfam 311 329
IPR000967 Znf_NFX1 Pfam 512 522
IPR000967 Znf_NFX1 Pfam 613 623
IPR000967 Znf_NFX1 Pfam 258 275
IPR000967 Znf_NFX1 Pfam 531 540
IPR034078 NFX1_fam PANTHER 32 901
IPR001841 Znf_RING ProSiteProfiles 105 156
IPR000967 Znf_NFX1 SMART 205 223
IPR000967 Znf_NFX1 SMART 728 749
IPR000967 Znf_NFX1 SMART 311 330
IPR000967 Znf_NFX1 SMART 665 683
IPR000967 Znf_NFX1 SMART 258 277
IPR000967 Znf_NFX1 SMART 613 634
IPR000967 Znf_NFX1 SMART 508 523
IPR000967 Znf_NFX1 SMART 418 437
IPR000967 Znf_NFX1 SMART 531 576
IPR000967 Znf_NFX1 SMART 365 385
IPR000967 Znf_NFX1 SMART 445 464

No CAZYmes available for this sequence

No external refs found!