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  5. Sevir.2G403000.1

Sevir.2G403000.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0029377 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0029377_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G403000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G403000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_97
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_26


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom CDD 17 73
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 62 74
IPR002048 EF_hand_dom SMART 17 45
IPR002048 EF_hand_dom SMART 53 81
IPR002048 EF_hand_dom Pfam 19 40
IPR002048 EF_hand_dom Pfam 58 78
IPR002048 EF_hand_dom ProSiteProfiles 13 48
IPR011992 EF-hand-dom_pair SUPERFAMILY 15 78
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 26 38

No CAZYmes available for this sequence

No external refs found!