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  5. Sevir.2G406700.1

Sevir.2G406700.1


Description : ethylene induced calmodulin binding protein


Gene families : OG_01_0006861 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006861_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G406700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G406700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_143
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_50


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 608 850
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 872 896
IPR013783 Ig-like_fold Gene3D 437 533
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 621 735
IPR000048 IQ_motif_EF-hand-BS Pfam 874 893
IPR000048 IQ_motif_EF-hand-BS Pfam 850 869
IPR027417 P-loop_NTPase SUPERFAMILY 847 899
IPR005559 CG-1_dom SMART 19 137
IPR002110 Ankyrin_rpt SMART 675 704
IPR005559 CG-1_dom Pfam 22 135
IPR002110 Ankyrin_rpt Pfam 676 706
IPR005559 CG-1_dom ProSiteProfiles 16 142
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 849 878
IPR002110 Ankyrin_rpt ProSiteProfiles 675 707
IPR002909 IPT_dom Pfam 444 517
IPR014756 Ig_E-set SUPERFAMILY 444 530
IPR000048 IQ_motif_EF-hand-BS SMART 871 893
IPR000048 IQ_motif_EF-hand-BS SMART 848 870

No CAZYmes available for this sequence

No external refs found!