Sevir.2G414600.2

Description : SC35-like splicing factor 30A

Gene families : OG_01_0009695 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009695_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G414600.2
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G414600.2
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_75
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	30	145
IPR000504	RRM_dom	ProSiteProfiles	37	115
IPR000504	RRM_dom	Pfam	39	108
IPR035979	RBD_domain_sf	SUPERFAMILY	37	142
IPR000504	RRM_dom	SMART	38	111

No CAZYmes available for this sequence

External Links

No external refs found!