Bradi2g14340.5

Description : DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases

Gene families : OG_01_0001831 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001831_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g14340.5
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017025	TBP-class protein binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140296	general transcription initiation factor binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	ISM	GOs from InterProScan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044078	Mot1_ATP-bd	CDD	1478	1709
IPR001650	Helicase_C	SMART	1863	1976
IPR016024	ARM-type_fold	SUPERFAMILY	6	1518
IPR021133	HEAT_type_2	ProSiteProfiles	1320	1355
IPR001650	Helicase_C	Pfam	1847	1976
IPR014001	Helicase_ATP-bd	SMART	1474	1670
IPR022707	Mot1_central_dom	Pfam	805	1259
IPR011989	ARM-like	Gene3D	3	98
IPR001650	Helicase_C	ProSiteProfiles	1839	2026
IPR014001	Helicase_ATP-bd	ProSiteProfiles	1490	1659
IPR038718	SNF2-like_sf	Gene3D	1448	1708
IPR011989	ARM-like	Gene3D	520	764
IPR000330	SNF2_N	Pfam	1497	1788
IPR000357	HEAT	Pfam	1320	1349
IPR027417	P-loop_NTPase	Gene3D	1719	2056
IPR027417	P-loop_NTPase	SUPERFAMILY	1710	2032
IPR027417	P-loop_NTPase	SUPERFAMILY	1453	1709
IPR011989	ARM-like	Gene3D	1096	1436
IPR044972	Mot1	PANTHER	1	2026

No CAZYmes available for this sequence

External Links

No external refs found!

Bradi2g14340.5

Expression Profile

Co-expression Networks

Functional Annotation