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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0011429 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011429_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g15210.3 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 389 | 423 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 491 | 525 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 283 | 317 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 181 | 215 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 388 | 437 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 491 | 539 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 283 | 334 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 132 | 242 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 37 | 121 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 340 | 446 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 243 | 339 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 391 | 425 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 183 | 217 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 493 | 526 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 153 | 176 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 286 | 313 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 464 | 679 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 73 | 99 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 183 | 209 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 153 | 176 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 565 | 589 |
No CAZYmes available for this sequence
| No external refs found! |