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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0008575 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008575_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g15700.1 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_28 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0008270 | zinc ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | Pfam | 158 | 205 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 361 | 408 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 561 | 609 |
| IPR032867 | DYW_dom | Pfam | 736 | 858 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 361 | 395 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 364 | 396 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 564 | 598 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 233 | 261 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 262 | 295 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 334 | 360 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 599 | 633 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 161 | 194 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 597 | 627 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 334 | 360 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 464 | 490 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 435 | 462 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 233 | 256 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 262 | 290 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 330 | 360 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 415 | 523 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 562 | 596 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 212 | 310 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 311 | 414 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 159 | 193 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 260 | 294 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 45 | 211 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 581 | 743 |
No CAZYmes available for this sequence
| No external refs found! |