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  5. Bradi2g17847.3

Bradi2g17847.3


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_01_0006809 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006809_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g17847.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013591 Brevis_radix_dom Pfam 1000 1053
IPR000306 Znf_FYVE SMART 596 665
IPR000306 Znf_FYVE Pfam 598 664
IPR000408 Reg_chr_condens ProSiteProfiles 494 545
IPR017455 Znf_FYVE-rel ProSiteProfiles 602 664
IPR009091 RCC1/BLIP-II SUPERFAMILY 213 599
IPR000408 Reg_chr_condens ProSitePatterns 418 428
IPR027988 BRX_N Pfam 872 906
IPR009091 RCC1/BLIP-II Gene3D 183 436
IPR000408 Reg_chr_condens ProSiteProfiles 325 379
IPR011993 PH-like_dom_sf Gene3D 2 121
IPR000408 Reg_chr_condens ProSiteProfiles 546 597
IPR011011 Znf_FYVE_PHD SUPERFAMILY 598 666
IPR013083 Znf_RING/FYVE/PHD Gene3D 598 675
IPR013591 Brevis_radix_dom ProSiteProfiles 999 1054
IPR000408 Reg_chr_condens PRINTS 179 195
IPR000408 Reg_chr_condens PRINTS 382 396
IPR000408 Reg_chr_condens PRINTS 541 562
IPR000408 Reg_chr_condens PRINTS 483 501
IPR000408 Reg_chr_condens PRINTS 366 382
IPR000408 Reg_chr_condens PRINTS 325 341
IPR009091 RCC1/BLIP-II Gene3D 437 597
IPR000408 Reg_chr_condens ProSiteProfiles 442 493
IPR000408 Reg_chr_condens ProSiteProfiles 273 324
IPR000408 Reg_chr_condens Pfam 324 375
IPR000408 Reg_chr_condens Pfam 444 490
IPR000408 Reg_chr_condens Pfam 379 428
IPR000408 Reg_chr_condens Pfam 273 321
IPR000408 Reg_chr_condens Pfam 493 542
IPR000408 Reg_chr_condens Pfam 547 594
IPR000408 Reg_chr_condens ProSiteProfiles 380 431

No CAZYmes available for this sequence

No external refs found!