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  5. Bradi2g18000.1

Bradi2g18000.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005135 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005135_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g18000.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0048188 Set1C/COMPASS complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 244 318
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 14 243
IPR001680 WD40_rpt ProSiteProfiles 241 282
IPR037867 Swd2/WDR82 PANTHER 5 318
IPR001680 WD40_rpt ProSiteProfiles 111 145
IPR001680 WD40_rpt SMART 15 54
IPR001680 WD40_rpt SMART 104 143
IPR001680 WD40_rpt SMART 234 273
IPR001680 WD40_rpt SMART 188 229
IPR001680 WD40_rpt SMART 276 313
IPR020472 G-protein_beta_WD-40_rep PRINTS 260 274
IPR020472 G-protein_beta_WD-40_rep PRINTS 41 55
IPR020472 G-protein_beta_WD-40_rep PRINTS 130 144
IPR001680 WD40_rpt Pfam 247 273
IPR001680 WD40_rpt Pfam 106 143
IPR001680 WD40_rpt Pfam 28 54
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 18 307
IPR001680 WD40_rpt ProSiteProfiles 22 63
IPR019775 WD40_repeat_CS ProSitePatterns 260 274

No CAZYmes available for this sequence

No external refs found!