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  5. Bradi2g25180.5

Bradi2g25180.5


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0014668 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014668_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g25180.5
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_148


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032867 DYW_dom Pfam 476 600
IPR011990 TPR-like_helical_dom_sf Gene3D 4 122
IPR011990 TPR-like_helical_dom_sf Gene3D 254 352
IPR011990 TPR-like_helical_dom_sf Gene3D 353 477
IPR011990 TPR-like_helical_dom_sf Gene3D 125 253
IPR002885 Pentatricopeptide_rpt Pfam 204 233
IPR002885 Pentatricopeptide_rpt Pfam 144 169
IPR002885 Pentatricopeptide_rpt Pfam 172 199
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 139 169
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 303 337
IPR002885 Pentatricopeptide_rpt TIGRFAM 305 339
IPR002885 Pentatricopeptide_rpt TIGRFAM 204 236
IPR002885 Pentatricopeptide_rpt TIGRFAM 172 197
IPR002885 Pentatricopeptide_rpt TIGRFAM 144 170
IPR002885 Pentatricopeptide_rpt TIGRFAM 340 373
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 146 331
IPR002885 Pentatricopeptide_rpt Pfam 303 350
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 170 204

No CAZYmes available for this sequence

No external refs found!