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  5. Sevir.2G433200.1

Sevir.2G433200.1


Description : DNA binding;zinc ion binding;DNA binding


Gene families : OG_01_0001915 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001915_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G433200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G433200.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_158


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018501 DDT_dom SMART 241 301
IPR019787 Znf_PHD-finger Pfam 435 477
IPR019787 Znf_PHD-finger ProSiteProfiles 432 479
IPR001965 Znf_PHD SMART 1360 1408
IPR001965 Znf_PHD SMART 1151 1196
IPR001965 Znf_PHD SMART 434 477
IPR011011 Znf_FYVE_PHD SUPERFAMILY 427 486
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1353 1414
IPR013083 Znf_RING/FYVE/PHD Gene3D 1354 1414
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 435 476
IPR013083 Znf_RING/FYVE/PHD Gene3D 422 495
IPR018501 DDT_dom Pfam 244 296
IPR018501 DDT_dom ProSiteProfiles 241 301
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1147 1201

No CAZYmes available for this sequence

No external refs found!