Sevir.2G435300.1

Description : beta-amylase 3

Gene families : OG_01_0030130 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0030130_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G435300.1	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G435300.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_115

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	73	513
IPR001554	Glyco_hydro_14	PRINTS	107	121
IPR001554	Glyco_hydro_14	PRINTS	128	146
IPR001554	Glyco_hydro_14	PRINTS	350	366
IPR001554	Glyco_hydro_14	PRINTS	367	378
IPR001554	Glyco_hydro_14	PRINTS	422	444
IPR001554	Glyco_hydro_14	PRINTS	238	260
IPR001554	Glyco_hydro_14	PRINTS	385	408
IPR001554	Glyco_hydro_14	PRINTS	314	333
IPR001554	Glyco_hydro_14	Pfam	76	487
IPR001554	Glyco_hydro_14	PANTHER	61	515

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH14	412	525	1.7e-137	76	488

External Links

No external refs found!