Bradi2g34960.1

Description : gamma-tubulin

Gene families : OG_01_0002143 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002143_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g34960.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
CC	GO:0000930	gamma-tubulin complex	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005874	microtubule	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	ISM	GOs from InterProScan
BP	GO:0007020	microtubule nucleation	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0031122	cytoplasmic microtubule organization	ISM	GOs from InterProScan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR037103	Tubulin/FtsZ-like_C	Gene3D	270	383
IPR008280	Tub_FtsZ_C	SUPERFAMILY	247	446
IPR000217	Tubulin	PANTHER	111	454
IPR000217	Tubulin	PANTHER	1	111
IPR036525	Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	2	246
IPR003008	Tubulin_FtsZ_GTPase	Pfam	4	214
IPR002454	Gamma_tubulin	CDD	3	438
IPR002454	Gamma_tubulin	PRINTS	116	131
IPR002454	Gamma_tubulin	PRINTS	366	386
IPR002454	Gamma_tubulin	PRINTS	193	206
IPR002454	Gamma_tubulin	PRINTS	31	51
IPR002454	Gamma_tubulin	PRINTS	251	262
IPR002454	Gamma_tubulin	PRINTS	286	301
IPR002454	Gamma_tubulin	PRINTS	341	364
IPR002454	Gamma_tubulin	PRINTS	423	446
IPR036525	Tubulin/FtsZ_GTPase_sf	Gene3D	1	269
IPR023123	Tubulin_C	Gene3D	384	445
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	SMART	249	395
IPR000217	Tubulin	PRINTS	11	31
IPR000217	Tubulin	PRINTS	108	132
IPR000217	Tubulin	PRINTS	382	410
IPR000217	Tubulin	PRINTS	193	213
IPR000217	Tubulin	PRINTS	52	71
IPR000217	Tubulin	PRINTS	179	192
IPR000217	Tubulin	PRINTS	134	152
IPR000217	Tubulin	PRINTS	96	107
IPR000217	Tubulin	PRINTS	153	174
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	Pfam	264	393
IPR017975	Tubulin_CS	ProSitePatterns	142	148
IPR003008	Tubulin_FtsZ_GTPase	SMART	48	247

No CAZYmes available for this sequence

External Links

No external refs found!

Bradi2g34960.1

Expression Profile

Co-expression Networks

Functional Annotation