- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : pumilio 3
Gene families : OG_01_0007041 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007041_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g39240.2 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR016024 | ARM-type_fold | SUPERFAMILY | 534 | 869 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 696 | 732 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 624 | 659 |
| IPR012940 | NABP | Pfam | 334 | 550 |
| IPR012940 | NABP | Pfam | 230 | 356 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 769 | 804 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 805 | 846 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 733 | 768 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 552 | 587 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 628 | 661 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 671 | 694 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 819 | 846 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 700 | 735 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 738 | 771 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 773 | 806 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 593 | 625 |
| IPR001313 | Pumilio_RNA-bd_rpt | Pfam | 556 | 590 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 588 | 623 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 733 | 768 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 811 | 846 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 660 | 695 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 696 | 731 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 624 | 659 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 769 | 804 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 588 | 623 |
| IPR001313 | Pumilio_RNA-bd_rpt | SMART | 552 | 587 |
| IPR033133 | PUM-HD | ProSiteProfiles | 532 | 872 |
| IPR033712 | Pumilio_RNA-bd | CDD | 553 | 868 |
| IPR011989 | ARM-like | Gene3D | 533 | 876 |
| IPR001313 | Pumilio_RNA-bd_rpt | ProSiteProfiles | 660 | 695 |
No CAZYmes available for this sequence
| No external refs found! |