Bradi2g40600.1

Description : Minichromosome maintenance (MCM2/3/5) family protein

Gene families : OG_01_0013451 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013451_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g40600.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_106

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003678	DNA helicase activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	ISM	GOs from InterProScan
BP	GO:0006270	DNA replication initiation	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	ISM	GOs from InterProScan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042555	MCM complex	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036388	WH-like_DNA-bd_sf	Gene3D	765	854
IPR012340	NA-bd_OB-fold	SUPERFAMILY	165	397
IPR008047	MCM_4	PRINTS	462	473
IPR008047	MCM_4	PRINTS	608	625
IPR008047	MCM_4	PRINTS	320	332
IPR008047	MCM_4	PRINTS	760	769
IPR008047	MCM_4	PRINTS	269	282
IPR001208	MCM_dom	ProSiteProfiles	446	652
IPR003593	AAA+_ATPase	SMART	488	749
IPR008047	MCM_4	PANTHER	89	854
IPR018525	MCM_CS	ProSitePatterns	555	563
IPR001208	MCM_dom	PRINTS	487	502
IPR001208	MCM_dom	PRINTS	626	634
IPR001208	MCM_dom	PRINTS	547	561
IPR001208	MCM_dom	PRINTS	575	588
IPR001208	MCM_dom	PRINTS	599	611
IPR031327	MCM	SMART	243	760
IPR027925	MCM_N	Pfam	144	236
IPR041562	MCM_lid	Pfam	673	758
IPR031327	MCM	PANTHER	89	854
IPR027417	P-loop_NTPase	SUPERFAMILY	457	772
IPR033762	MCM_OB	Pfam	247	376
IPR027417	P-loop_NTPase	Gene3D	431	764
IPR001208	MCM_dom	Pfam	434	656

No CAZYmes available for this sequence

External Links

No external refs found!

Bradi2g40600.1

Expression Profile

Co-expression Networks

Functional Annotation