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  5. Bradi2g41690.3

Bradi2g41690.3


Description : stomatal cytokinesis defective / SCD1 protein (SCD1)


Gene families : OG_01_0005976 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005976_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g41690.3
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 971 985
IPR001680 WD40_rpt ProSiteProfiles 1076 1108
IPR043153 DENN_C Gene3D 205 390
IPR037516 Tripartite_DENN ProSiteProfiles 22 448
IPR001194 cDENN_dom Pfam 127 307
IPR001680 WD40_rpt SMART 1029 1066
IPR001680 WD40_rpt SMART 1167 1206
IPR001680 WD40_rpt SMART 987 1026
IPR001680 WD40_rpt SMART 906 943
IPR001680 WD40_rpt SMART 1069 1108
IPR001680 WD40_rpt SMART 850 901
IPR001680 WD40_rpt SMART 1112 1149
IPR001680 WD40_rpt SMART 946 984
IPR005112 dDENN_dom Pfam 400 452
IPR005113 uDENN_dom SMART 4 107
IPR001680 WD40_rpt ProSiteProfiles 883 901
IPR019775 WD40_repeat_CS ProSitePatterns 1193 1207
IPR001680 WD40_rpt ProSiteProfiles 953 993
IPR001194 cDENN_dom SMART 125 309
IPR001680 WD40_rpt Pfam 1032 1066
IPR001680 WD40_rpt Pfam 1071 1107
IPR001680 WD40_rpt Pfam 952 984
IPR001680 WD40_rpt Pfam 852 901
IPR001680 WD40_rpt Pfam 911 943
IPR001680 WD40_rpt ProSiteProfiles 913 943
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1036 1210
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 815 1035
IPR001680 WD40_rpt ProSiteProfiles 1036 1075
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 854 1209
IPR005112 dDENN_dom SMART 369 439
IPR005113 uDENN_dom Pfam 38 106
IPR020472 G-protein_beta_WD-40_rep PRINTS 971 985
IPR020472 G-protein_beta_WD-40_rep PRINTS 888 902
IPR020472 G-protein_beta_WD-40_rep PRINTS 1053 1067

No CAZYmes available for this sequence

No external refs found!