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  5. Sevir.2G445600.1

Sevir.2G445600.1


Description : Melibiase family protein


Gene families : OG_01_0002097 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002097_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G445600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G445600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_159
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_70


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 59 331
IPR002241 Glyco_hydro_27 Pfam 67 330
IPR002241 Glyco_hydro_27 PRINTS 265 284
IPR002241 Glyco_hydro_27 PRINTS 139 160
IPR002241 Glyco_hydro_27 PRINTS 62 81
IPR002241 Glyco_hydro_27 PRINTS 98 113
IPR002241 Glyco_hydro_27 PRINTS 173 190
IPR002241 Glyco_hydro_27 PRINTS 286 307
IPR002241 Glyco_hydro_27 PRINTS 200 218
IPR002241 Glyco_hydro_27 CDD 68 330
IPR041233 Melibiase_C Pfam 348 421
IPR013785 Aldolase_TIM Gene3D 60 332
IPR002241 Glyco_hydro_27 PANTHER 45 422
IPR013780 Glyco_hydro_b Gene3D 333 425
HMM Family HMM Length Query Length e-Value Query Start Query End
GH27 229 432 1.2e-92 164 400
No external refs found!