1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi2g43087.1

Bradi2g43087.1


Description : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain


Gene families : OG_01_0004782 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004782_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g43087.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96


Type GO Term Name Evidence Source
MF GO:0003714 transcription corepressor activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044716 LEUNIG-like PANTHER 144 950
IPR006594 LisH ProSiteProfiles 10 42
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 801 950
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 659 950
IPR044716 LEUNIG-like PANTHER 3 145
IPR019775 WD40_repeat_CS ProSitePatterns 722 736
IPR006594 LisH Pfam 12 38
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 640 800
IPR001680 WD40_rpt ProSiteProfiles 703 744
IPR001680 WD40_rpt SMART 696 735
IPR001680 WD40_rpt SMART 739 779
IPR001680 WD40_rpt SMART 869 908
IPR001680 WD40_rpt SMART 654 693
IPR001680 WD40_rpt SMART 911 950
IPR001680 WD40_rpt SMART 825 863
IPR001680 WD40_rpt SMART 782 821
IPR001680 WD40_rpt ProSiteProfiles 746 788
IPR001680 WD40_rpt ProSiteProfiles 918 950
IPR006594 LisH SMART 10 42
IPR001680 WD40_rpt Pfam 668 692
IPR001680 WD40_rpt Pfam 743 779
IPR001680 WD40_rpt Pfam 831 863
IPR001680 WD40_rpt Pfam 699 735
IPR001680 WD40_rpt ProSiteProfiles 661 692

No CAZYmes available for this sequence

No external refs found!