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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0013176 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013176_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g43100.3 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_34 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 235 | 269 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 510 | 536 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 338 | 371 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 237 | 270 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 475 | 507 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 208 | 231 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 439 | 472 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 310 | 336 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 75 | 257 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 98 | 188 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 189 | 288 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 294 | 394 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 237 | 267 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 209 | 231 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 439 | 469 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 310 | 335 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 395 | 602 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 336 | 370 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 437 | 471 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 336 | 382 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 471 | 519 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 507 | 541 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 472 | 506 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 305 | 335 |
No CAZYmes available for this sequence
| No external refs found! |