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  5. Bradi2g58210.1

Bradi2g58210.1


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_01_0006647 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006647_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi2g58210.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 370 404
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 405 439
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 440 474
IPR002885 Pentatricopeptide_rpt Pfam 404 452
IPR002885 Pentatricopeptide_rpt Pfam 233 275
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 228 262
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 263 297
IPR011990 TPR-like_helical_dom_sf Gene3D 333 430
IPR011990 TPR-like_helical_dom_sf Gene3D 431 486
IPR002885 Pentatricopeptide_rpt Pfam 304 324
IPR002885 Pentatricopeptide_rpt Pfam 376 402
IPR002885 Pentatricopeptide_rpt Pfam 196 220
IPR002885 Pentatricopeptide_rpt TIGRFAM 196 228
IPR002885 Pentatricopeptide_rpt TIGRFAM 230 263
IPR002885 Pentatricopeptide_rpt TIGRFAM 376 406
IPR002885 Pentatricopeptide_rpt TIGRFAM 265 295
IPR002885 Pentatricopeptide_rpt TIGRFAM 442 476
IPR011990 TPR-like_helical_dom_sf Gene3D 158 332

No CAZYmes available for this sequence

No external refs found!